XLinkDB 6.0
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Bruce Lab
Choose a Species-Level Network:
Generate an XL-MS network from all datasets for a given organism.
Species networks can take a while to load (up to 2 min). Please be
patient
while the network loads.
For more information and help, please go to the
Help
page.
Non-redundant Cross-linked Relationships in XLinkDB Datasets
-- Unique peptides and crosslink positions --
Species
Public Datasets
A.baumannii
A.baylyi
B.burgdorferi
B.taurus
C.elegans
C.jejuni
C.reinhardtii
C.thermophilum
D.citri
D.melanogaster
E.caballus
E.coli
H.sapiens
M.musculus
P.aeruginosa
S.cerevisiae
S.oneidensis
-----
Total
1,954
0
0
1,198
0
0
769
0
1,571
0
229
6,086
24,193
22,546
602
1,450
24
-----
60,622
Generate an XL-MS interaction
network
.
Interactive views of entire species networks.
Use
xiNET
In depth analysis of cross-linked sites.
Select Species:
A.baumannii
B.taurus
C.reinhardtii
D.citri
E.caballus
E.coli
H.sapiens
M.musculus
P.aeruginosa
S.cerevisiae
S.oneidensis
Generate Species
xiNET Network
Use
Cytoscape.js
Fastest load time.
Select Species:
A.baumannii
B.taurus
C.reinhardtii
D.citri
E.caballus
E.coli
H.sapiens
M.musculus
P.aeruginosa
S.cerevisiae
S.oneidensis
Generate Species
Cytoscape.js Network
Generate an XL-MS interaction
table
.
For structure selection and table download.
Select Species:
A.baumannii
B.taurus
C.reinhardtii
D.citri
E.caballus
E.coli
H.sapiens
M.musculus
P.aeruginosa
S.cerevisiae
S.oneidensis
Generate Species
Table
*Hover over input links for tooltip information.
